Julia Copeland

Julia Copeland
Sequencing Technician / Bioinformatics
Microbiome Specialist


Characterization and predictive functional profiles on metagenomic 16S rRNA data of liver transplant recipients: A longitudinal study.
Sivaraj, S, Copeland, JK, Malik, A, Pasini, E, Angeli, M, Azhie, A, Husain, S, Kumar, D, Allard, J, Guttman, DS, Humar, A, Bhat, M.
Clin Transplant.,2021. PubMed PMID:34781411

Oligosaccharides and Microbiota in Human Milk Are Interrelated at 3 Months Postpartum in a Cohort of Women with a High Prevalence of Gestational Impaired Glucose Tolerance.
LeMay-Nedjelski, L, Yonemitsu, C, Asbury, MR, Butcher, J, Ley, SH, Hanley, AJ, Kiss, A, Unger, S, Copeland, JK, Wang, PW, Stintzi, A, Bode, L, O'Connor, DL.
J Nutr.151,2021. PubMed PMID:34510198

The Impact of Migration on the Gut Metagenome of South Asian Canadians.
Copeland, JK, Chao, G, Vanderhout, S, Acton, E, Wang, PW, Benchimol, EI, El Sohami, A, Croitoru, K, Gommerman, JL, Guttman, DS, GEMINI Research Team.
Gut Microbes.13,. PubMed PMID:33794735

Assessment of Inter-Laboratory Variation in the Characterization and Analysis of the Mucosal Microbiota in Crohn's Disease and Ulcerative Colitis.
Szamosi, JC, Forbes, JD, Copeland, JK, Knox, NC, Shekarriz, S, Rossi, L, Graham, M, Bonner, C, Guttman, DS, Van Domselaar, G, Surette, MG, Bernstein, CN.
Front Microbiol.11,2020. PubMed PMID:32973734

Mothers of Preterm Infants Have Individualized Breast Milk Microbiota that Changes Temporally Based on Maternal Characteristics.
Asbury, MR, Butcher, J, Copeland, JK, Unger, S, Bando, N, Comelli, EM, Forte, V, Kiss, A, LeMay-Nedjelski, L, Sherman, PM, Stintzi, A, Tomlinson, C, Wang, PW, O'Connor, DL.
Cell Host Microbe.28,2020. PubMed PMID:32888417

Maternal Diet and Infant Feeding Practices Are Associated with Variation in the Human Milk Microbiota at 3 Months Postpartum in a Cohort of Women with High Rates of Gestational Glucose Intolerance.
LeMay-Nedjelski, L, Asbury, MR, Butcher, J, Ley, SH, Hanley, AJ, Kiss, A, Unger, S, Copeland, JK, Wang, PW, Stintzi, A, O'Connor, DL.
J Nutr.151,2021. PubMed PMID:32886107

Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum.
LeMay-Nedjelski, L, Butcher, J, Ley, SH, Asbury, MR, Hanley, AJ, Kiss, A, Unger, S, Copeland, JK, Wang, PW, Zinman, B, Stintzi, A, O'Connor, DL.
BMC Microbiol.20,2020. PubMed PMID:32689933

A practical assessment of nano-phosphate on soybean (Glycine max) growth and microbiome establishment.
McKnight, MM, Qu, Z, Copeland, JK, Guttman, DS, Walker, VK.
Sci Rep.10,2020. PubMed PMID:32499485

Limiting oxidative DNA damage reduces microbe-induced colitis-associated colorectal cancer.
Irrazabal, T, Thakur, BK, Kang, M, Malaise, Y, Streutker, C, Wong, EOY, Copeland, J, Gryfe, R, Guttman, DS, Navarre, WW, Martin, A.
Nat Commun.11,2020. PubMed PMID:32286276

Gut-associated IgA+ immune cells regulate obesity-related insulin resistance.
Luck, H, Khan, S, Kim, JH, Copeland, JK, Revelo, XS, Tsai, S, Chakraborty, M, Cheng, K, Tao Chan, Y, Nøhr, MK, Clemente-Casares, X, Perry, MC, Ghazarian, M, Lei, H, Lin, YH, Coburn, B, Okrainec, A, Jackson, T, Poutanen, S, Gaisano, H, Allard, JP, Guttman, DS, Conner, ME, Winer, S, Winer, DA.
Nat Commun.10,2019. PubMed PMID:31409776

Mycobiome Sequencing and Analysis Applied to Fungal Community Profiling of the Lower Respiratory Tract During Fungal Pathogenesis.
McTaggart, LR, Copeland, JK, Surendra, A, Wang, PW, Husain, S, Coburn, B, Guttman, DS, Kus, JV.
Front Microbiol.10,2019. PubMed PMID:30930884

Methods and Strategies to Examine the Human Breastmilk Microbiome.
LeMay-Nedjelski, L, Copeland, J, Wang, PW, Butcher, J, Unger, S, Stintzi, A, O'Connor, DL.
Methods Mol Biol.1849,2018. PubMed PMID:30298248

Chloroplast sequence variation and the efficacy of peptide nucleic acids for blocking host amplification in plant microbiome studies.
Fitzpatrick, CR, Lu-Irving, P, Copeland, J, Guttman, DS, Wang, PW, Baltrus, DA, Dlugosch, KM, Johnson, MTJ.
Microbiome.6,2018. PubMed PMID:30121081

Assembly and ecological function of the root microbiome across angiosperm plant species.
Fitzpatrick, CR, Copeland, J, Wang, PW, Guttman, DS, Kotanen, PM, Johnson, MTJ.
Proc Natl Acad Sci U S A.115,2018. PubMed PMID:29358405

Metabolic Reprogramming by Hexosamine Biosynthetic and Golgi N-Glycan Branching Pathways.
Ryczko, MC, Pawling, J, Chen, R, Abdel Rahman, AM, Yau, K, Copeland, JK, Zhang, C, Surendra, A, Guttman, DS, Figeys, D, Dennis, JW.
Sci Rep.6,2016. PubMed PMID:26972830

Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation.
Kim, SH, Clark, ST, Surendra, A, Copeland, JK, Wang, PW, Ammar, R, Collins, C, Tullis, DE, Nislow, C, Hwang, DM, Guttman, DS, Cowen, LE.
PLoS Pathog.11,2015. PubMed PMID:26588216

Regulation of obesity-related insulin resistance with gut anti-inflammatory agents.
Luck, H, Tsai, S, Chung, J, Clemente-Casares, X, Ghazarian, M, Revelo, XS, Lei, H, Luk, CT, Shi, SY, Surendra, A, Copeland, JK, Ahn, J, Prescott, D, Rasmussen, BA, Chng, MH, Engleman, EG, Girardin, SE, Lam, TK, Croitoru, K, Dunn, S, Philpott, DJ, Guttman, DS, Woo, M, Winer, S, Winer, DA.
Cell Metab.21,2015. PubMed PMID:25863246

Seasonal community succession of the phyllosphere microbiome.
Copeland, JK, Yuan, L, Layeghifard, M, Wang, PW, Guttman, DS.
Mol Plant Microbe Interact.28,2015. PubMed PMID:25679538

Gut microbial metabolism drives transformation of MSH2-deficient colon epithelial cells.
Belcheva, A, Irrazabal, T, Robertson, SJ, Streutker, C, Maughan, H, Rubino, S, Moriyama, EH, Copeland, JK, Surendra, A, Kumar, S, Green, B, Geddes, K, Pezo, RC, Navarre, WW, Milosevic, M, Wilson, BC, Girardin, SE, Wolever, TMS, Edelmann, W, Guttman, DS, Philpott, DJ, Martin, A.
Cell.158,2014. PubMed PMID:25036629

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